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Home of the Soderlund lab |
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The Soderlund lab is part of the
BIO5 Institute at the University of Arizona
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Lab | Publications | Grants |
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Software |
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TCW Transcriptome computational workbench
Build and query an annotated database with gene ontology and differential expression. Build and query a comparative transcriptome database.
Available at Github
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SyMAP Synteny mapping and analysis program
Compute the synteny between two sequences genomes or a sequenced genome and FPC map. Query and view two or more genomes at a time.
Available at Github
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AW Allele Workbench for allele-specific expression
A pipeline to compute heterozygous SNPs from RNAseq data. Compute Allele Imbalance (AI). Query and view the results.
Available at Github
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FPC FingerPrinted Contigs for building physical maps
Compute a physical map from restriction fragments. Query and view the resulting contigs.
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Supported websites |
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Heterosis Allele Specific Expression of SNPs for mouse hybrids |
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Maize FL cDNA's 27,455 Full Length cDNA's |
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Supported by |
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