| |
|
| |
Home of the Soderlund lab |
| |
The Soderlund lab is part of the BIO5 Institute at the University of Arizona
|
| |
Lab
| Publications
| Grants
|
|
| |
Software
|
| |
TCW
Transcriptome computational workbench
Build and query an annotated database with gene ontology and differential expression.
Build and query a comparative transcriptome database.
|
|
| |
SyMAP
Synteny mapping and analysis program
Build the synteny between two sequences genomes or a sequenced genome and FPC map.
Query and view two or more genomes at a time.
|
|
| |
AW
Allele Workbench for allele-specific expression
A pipeline to compute heterozygous SNPs from RNAseq data. Compute Allele Imbalance (AI).
Query and view the results.
|
|
| |
FPC
FingerPrinted Contigs for building physical maps
Compute a physical map from restriction fragments. Query and view the resulting contigs.
|
|
| |
Projects |
| |
Homoptera
Transcritome analysis of various species |
| |
Heterosis
Allele Specific Expression of SNPs for mouse hybrids |
| |
MGOS
Magnaportha Oryza Community Annotation database |
| |
Maize FL cDNA's
27,455 Full Length cDNA's
|
| |
Kartchner Cavern
Metagenomics of various regions of the cave
|
|
| |
Transcriptomes:
Basil
| Ginger-Turmeric
| Cotton
| Trichomes
| Elm
|
|
| |
Supported by |
| |
|
