------ ConvertEnsembl ./data/seq/cabbE on 09-Jul-26 ------
Log file to  ./data/seq/cabbE/xConvertENS.log
Parameters:
   Project Directory: ./data/seq/cabbE
   Verbose
Processing ./data/seq/cabbE/Brassica_oleracea.BOL.dna_sm.toplevel.fa.gz
   C1      C1               43,764,888
   C2      C2               52,886,895
   C3      C3               64,984,695
   C4      C4               53,719,093
   C5      C5               46,902,585
   C6      C6               39,822,476
   C7      C7               48,366,697
   C8      C8               41,758,685
   C9      C9               54,679,868
   Sequences not output: 32,919

   A  69,247,430  a  61,229,198
   T  69,276,626  t  61,218,908
   C  40,952,680  c  32,332,328
   G  40,973,403  g  32,310,317
   N         305  n  39,344,687
   Total written: 446,885,882
Finish writing ./data/seq/cabbE/sequence/genomic.fna

Gaps >= 30,000: 39 (using N and n)
Finish writing ./data/seq/cabbE/annotation/gap.gff

All sequences
       9 Chromosomes  Output 9         446,885,882
       0 Mt/Pt        Output 0                   0
  32,919 Scaffolds    Output 0          41,736,625

Processing ./data/seq/cabbE/Brassica_oleracea.BOL.59.gff3.gz
   Process 50000 genes...
   Chromosome gene count: 54,761
   C1      C1                 5,401
   C2      C2                 5,842
   C3      C3                 8,489
   C4      C4                 6,426
   C5      C5                 5,849
   C6      C6                 4,762
   C7      C7                 5,751
   C8      C8                 5,599
   C9      C9                 6,642
   Genes not included in GFF file: 4,459

   54,761 Gene from 59,225 (protein coding)
   54,761 mRNA from 59,225 (canonical or longest)
  256,428 Exon from 269,978
  256,428 CDS  from 268,591
Finish writing ./data/seq/cabbE/annotation/anno.gff

Gene Source (col 2)
     54,761 brad

Gene attribute keywords (col 8)
     54,761 ID                         54,761 biotype                    14,914 description
     54,761 gene_id                    54,761 logic_name

------ Finish ConvertEnsembl ./data/seq/cabbE -------